Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015909536.1_cds_XP_016459726.1_53224
CDS Infomation

[gene=LOC107783265] [db_xref=GeneID:107783265] [protein=calcium-dependent protein kinase 1-like] [protein_id=XP_016459726.1] [location=join(26230..27034,27615..27758,28908..29060,29872..29987,30105..30272,30774..30998,32014..32139)] [gbkey=CDS]
Sequence

ATGGGGAACACTTGTGTAGGACCAAGCATTTCTAAAAATGGGATCTTTCAATCAGTTTCA
GCAGCAATGTGGCGATCCCGGTCGCCCGATGACACTGCTTCCACCACTAATGGTGAAAGT
GCTAGAATTGAAACACCAATTTCTGTTAAAGAACCTGATTCACCTTTGCCAGTTCAAGAG
CCACCAGAACAAATGACAATGCCTAAGTCAGAAAAGAAAGAAGAAGAAAAAGAACAACCA
AAAAAGCCCAAAAAGCCTGCTGAAATGAAGAGGGTGTCAAGTGCTGGCCTTAGGACAGAT
TCTGTGTTACAAAAGAAAACTGGAAACTTAAAGGAGTTTTTCAGTATAGGAAAGAAATTA
GGACAAGGTCAATTTGGAACTACATTTAAATGTGTCGAAAAGGCAACAGGGAAGGAATAT
GCTTGCAAATCGATTGCTAAGAGGAAGTTGTTAACAGATGATGATGTGGAAGATGTTAGA
AGGGAAGTACAGATAATGCACCATTTGGCAGGACATCCTCATGTTATATCGATAAAAGGT
GCTTATGAGGATGCTGTAGCTGTTCATGTAGTTATGGAGTTTTGTGCTGGGGGTGAGCTT
TTCGATAGGATTATTCAACGGGGGCACTATACAGAAAGAAAAGCAGCTGAGCTTACTAGG
ACTATTGTTGGAGTTGTAGAAGCTTGTCATTCTCTTGGTGTCATGCATCGTGATCTTAAG
CCTGAAAATTTTCTCTTTGTTGATCAGAAGGAGGATTCACTTCTCAAAGCAATTGACTTT
GGGTTATCGATATTCTTCAAACCAGGCGACAGATTTACTGATGTTGTTGGCAGTCCATAT
TATGTTGCACCAGAAGTTCTCCGAAAACGTTATGGTCCTGAAGCTGATGTTTGGAGTGCT
GGTGTAATTATCTACATCTTATTAAGTGGAGTACCTCCTTTCTGGGCTGAAAATGAGCAA
GGAATATTTGAACAAGTCCTGCACGGTGATCTTGACTTCACGTCAGACCCATGGCCAAGT
ATTTCAGAAGATGCAAAAGACTTGATGAGGAGAATGCTCGTTCGAGATCCGAGAAGACGT
TTAACTGCACATGAAGTTTTATGCCATCCTTGGGTACAAGTTGATGGTGTGGCTCCCGAT
AAGCCTCTGGATTCTGCAGTTCTGAGTAGAATGAAGCAATTTTCTGCAATGAACAAGCTC
AAGAAAATGGCTTTGAGAGTCATTGCTGAAAGCCTATCCGAAGAAGAAATTGCTGGTCTT
AAAGAAATGTTCAAGATGATAGACACAGACAATAGCGGTCAAATAACTTTTGAGGAGCTC
AAAGATGGGTTAAAACGATTTGGCTCTAATCTGAAGGAGTCCGAGATCTATGATCTTATG
CAGGCAGCTGACGTTGATAACAGTGGAACAATTGATTATGGTGAATTTATAGCTGCAACA
TTACATATGAACAAAATTGAAAGACAAGATCATCTTTTTGCTGCTTTCTGTTACTTCGAT
AAAGATGGAAGTGGCTACATCACTGCGGATGAGCTTCAACAAGCTTGTGAAGAATTTGGC
ATTGGGGATGTCCGCATGGAAGAAATGATCAGAGAAGCTGACCAAGACAATGACGGGCGC
ATTGACTACAATGAGTTTGTTGCTATGATGCAAAAGGGAAATCCAGTGCTAGGTGGTGGC
AAGAAAGGTCTAGAGCATAGTTTCAGCATTGGATTCAGAGAAGCAGTAAAACTATAG

Peptide Sequence

PEP ID

XP_016459726.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 1-like [Nicotiana tabacum]
Sequence

MGNTCVGPSISKNGIFQSVSAAMWRSRSPDDTASTTNGESARIETPISVKEPDSPLPVQE
PPEQMTMPKSEKKEEEKEQPKKPKKPAEMKRVSSAGLRTDSVLQKKTGNLKEFFSIGKKL
GQGQFGTTFKCVEKATGKEYACKSIAKRKLLTDDDVEDVRREVQIMHHLAGHPHVISIKG
AYEDAVAVHVVMEFCAGGELFDRIIQRGHYTERKAAELTRTIVGVVEACHSLGVMHRDLK
PENFLFVDQKEDSLLKAIDFGLSIFFKPGDRFTDVVGSPYYVAPEVLRKRYGPEADVWSA
GVIIYILLSGVPPFWAENEQGIFEQVLHGDLDFTSDPWPSISEDAKDLMRRMLVRDPRRR
LTAHEVLCHPWVQVDGVAPDKPLDSAVLSRMKQFSAMNKLKKMALRVIAESLSEEEIAGL
KEMFKMIDTDNSGQITFEELKDGLKRFGSNLKESEIYDLMQAADVDNSGTIDYGEFIAAT
LHMNKIERQDHLFAAFCYFDKDGSGYITADELQQACEEFGIGDVRMEEMIREADQDNDGR
IDYNEFVAMMQKGNPVLGGGKKGLEHSFSIGFREAVKL

Transcript Sequence

Gene sequence data has not been registered.